BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039B12SP1|AL430668
(927 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1709 1767 0.0
>3x_Contig1709
Length = 16948
Score = 1767 bits (884), Expect = 0.0
Identities = 912/928 (98%), Gaps = 1/928 (0%)
Strand = Plus / Plus
Query: 1 aatgccctatcaggcacagaatgcatgcttttakaaggtattaccatcggtgatgatgct 60
|||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 1277 aatgccgtatcaggcacagaatgcatgcttttagaaggaattaccatcggtgatgatgct 1336
Query: 61 ggaccattgttcagtgctgactggaaagagataacgtcatcattttgaggdtcgttaaga 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1337 ggaccattgttcagtgctgactggaaagagataacgtcatcattttgaggatcgttaaga 1396
Query: 121 acccccaatatgtttctatcggattgtttgarttgtggggcaggcgacagagatgattgg 180
|||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1397 acccccaaaatgtttctatcggattgtttgaattgtggggcaggcgacagagatgattgg 1456
Query: 181 gatgaccygatagacgccatatgttgaggtgcttgctgctgcaaatggtgctgctggctt 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1457 gatgacccgatagacgccatatgttgaggtgcttgctgctgcaaatggtgctgctggctt 1516
Query: 241 gatggactgaraggrcgagatatttgactcgaactgttccagtagtcatccaattggtca 300
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1517 gatggactgaaaggacgagatatttgactcgaactgttccagtagtcatccaattggtca 1576
Query: 301 tttgtgaaggacagcgttgttcttggtttgtcaccaacatcagaraccatgttttcaaga 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1577 tttgtgaaggacagcgttgttcttggtttgtcaccaacatcagaaaccatgttttcaaga 1636
Query: 361 gctgagatcagatgcgaggratcctcatactcagtattgtggtaaaargtttcatgactt 420
||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1637 gctgagatcagatgcgaggaatcctcatactcagtattgtggtaaaaagtttcatgactt 1696
Query: 421 gacaaaggaggactatgggcgtgatcatgtgagtgaggaatctgattatggtcaatatgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1697 gacaaaggaggactatgggcgtgatcatgtgagtgaggaatctgattatggtcaatatgc 1756
Query: 481 tgctgctgctgctgtccttgttgcagccaagagctaaatggagcagaagcgacggtctgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1757 tgctgctgctgctgtccttgttgcagccaagagctaaatggagcagaagcgacggtctgc 1816
Query: 541 gcca-saaagatccagatgtattatvatttgtataggaggaaggatcatgcaggcgtaat 599
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1817 gccagcaaagatccagatgtattataatttgtataggaggaaggatcatgcaggcgtaat 1876
Query: 600 tgatgcgcttggggttgattctgaccagcaagatcgccattaataccgtgttgtgaaggt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1877 tgatgcgcttggggttgattctgaccagcaagatcgccattaataccgtgttgtgaaggt 1936
Query: 660 tgttgagacatcgagtatgtctgtaatgtaagttcattcttaagttgtgtattttccgcc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1937 tgttgagacatcgagtatgtctgtaatgtaagttcattcttaagttgtgtattttccgcc 1996
Query: 720 tgcatatctttccatactttctccaattggtcaattcttttgttaaacaaatgtttagag 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1997 tgcatatctttccatactttctccaattggtcaattcttttgttaaacaaatgtttagag 2056
Query: 780 gctttccattgattatccaatttagagtccatgtcaatctccgatctgatagtttgcact 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2057 gctttccattgattatccaatttagagtccatgtcaatctccgatctgatagtttgcact 2116
Query: 840 agttgagattgcgacggtaacgtattcaatagatcatcaccgcttgaagacaawaaccct 899
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2117 agttgagattgcgacggtaacgtattcaatagatcatcaccgcttgaagacaataaccct 2176
Query: 900 gacttggataaagtagaatcattaattc 927
||||||||||||||||||||||||||||
Sbjct: 2177 gacttggataaagtagaatcattaattc 2204
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5812
Number of Sequences: 1807
Number of extensions: 5812
Number of successful extensions: 210
Number of sequences better than 1.0e-20: 1
length of query: 927
length of database: 10,358,551
effective HSP length: 16
effective length of query: 911
effective length of database: 10,329,639
effective search space: 9410301129
effective search space used: 9410301129
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)